BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B02LP1|AL426314
(781 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1734 1540 0.0
>3x_Contig1734
Length = 17938
Score = 1540 bits (777), Expect = 0.0
Identities = 780/781 (99%)
Strand = Plus / Plus
Query: 1 gatcctccttgggaccagtgcggttggcagttggccaaaccttatcatcaattcgtgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8603 gatcctccttgggaccagtgcggttggcagttggccaaaccttatcatcaattcgtgaat 8662
Query: 61 tatcagaagttgctatagacatatttctccggatttttttatgcaaaggaagaaccagtc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8663 aatcagaagttgctatagacatatttctccggatttttttatgcaaaggaagaaccagtc 8722
Query: 121 tctttttatcgtttaaactttctatcttactatcctactctttctcagtatctcctatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8723 tctttttatcgtttaaactttctatcttactatcctactctttctcagtatctcctatct 8782
Query: 181 gttgaagctatagtatgttgatgataactcctacgtatggagactggacaactttccaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8783 gttgaagctatagtatgttgatgataactcctacgtatggagactggacaactttccaga 8842
Query: 241 caagagataaaccccaggaacagttctttagcaataaatattcaccgaagcagcatttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8843 caagagataaaccccaggaacagttctttagcaataaatattcaccgaagcagcatttct 8902
Query: 301 ttatatatatataagttgacatttctttagcttaaggaaacgcaccacattgttccggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8903 ttatatatatataagttgacatttctttagcttaaggaaacgcaccacattgttccggaa 8962
Query: 361 aaaaacgaaaaaaagtgaatcaggttgttctgcaggttccactattagattttctttctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8963 aaaaacgaaaaaaagtgaatcaggttgttctgcaggttccactattagattttctttctt 9022
Query: 421 tttctctctatttttccttttatttacctttttgagaaccgttgtacgggtatttctgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9023 tttctctctatttttccttttatttacctttttgagaaccgttgtacgggtatttctgtc 9082
Query: 481 ccggtttttcaattgtggagacgaagttgaattgaggagtttttccgataatacgctgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9083 ccggtttttcaattgtggagacgaagttgaattgaggagtttttccgataatacgctgtc 9142
Query: 541 aaaaagaagagaaattaatccggagggaagtgtctgtcagatctttccaatctgtcaggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9143 aaaaagaagagaaattaatccggagggaagtgtctgtcagatctttccaatctgtcaggt 9202
Query: 601 cagatagtcatatagggtgttaaatagatattgattgatattaagtattacaattatacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9203 cagatagtcatatagggtgttaaatagatattgattgatattaagtattacaattatacg 9262
Query: 661 ttacaaatgttaaaagtttgggcactatcagttttctttttttctaaggtggggagaaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9263 ttacaaatgttaaaagtttgggcactatcagttttctttttttctaaggtggggagaaag 9322
Query: 721 ctttcgttttatgctagatctaaatgcttgatacctgcatgggagaggttttcttcagtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9323 ctttcgttttatgctagatctaaatgcttgatacctgcatgggagaggttttcttcagtg 9382
Query: 781 g 781
|
Sbjct: 9383 g 9383
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,360
Number of Sequences: 1807
Number of extensions: 10360
Number of successful extensions: 95
Number of sequences better than 1.0e-20: 1
length of query: 781
length of database: 10,358,551
effective HSP length: 16
effective length of query: 765
effective length of database: 10,329,639
effective search space: 7902173835
effective search space used: 7902173835
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)